Merck Posted September 20, 2026

Senior Scientist, Respiratory Biology (Discovery Research)

South San Francisco, California, United States of America FULL_TIME
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About this opportunity

Job Description

The Senior Scientist will join the Respiratory Biology Discovery group and contribute to target identification, target validation, translational biology, and mechanism-of-action studies supporting early discovery programs in chronic lung diseases, including COPD, bronchiectasis, asthma, pulmonary fibrosis, and inflammatory airway diseases.

The successful candidate will leverage human-relevant in vitro, ex vivo, and translational experimental systems, with a particular emphasis on primary airway and alveolar epithelial biology, epithelial-stromal and immune-stromal interactions, tissue remodeling, fibrosis, regeneration, and biomarker discovery. The Senior Scientist will generate high-quality mechanistic datasets that inform target prioritization and program decisions and will collaborate closely within multidisciplinary discovery and translational teams.

Key Responsibilities:

Design, execute, and interpret in vitro and ex vivo studies to support respiratory target discovery, validation and translational biology programs.

Develop and apply disease‑relevant experimental systems, including primary airway epithelial cultures, air‑liquid interface (ALI) models, organoid systems, precision-cut lung slices (PCLS), and co-culture platforms.

Generate mechanistic datasets to investigate epithelial dysfunction, tissue remodeling, fibrosis, immune responses, and regenerative biology in chronic lung diseases.

Apply imaging techniques, including immunohistochemistry (IHC), immunofluorescence (IF), and high‑content imaging, with image‑based analysis to interrogate disease-relevant biology.

Perform and interpret flow cytometry/FACS‑based immune and cell phenotyping.

Support translational biomarker discovery and validation using patient-derived samples and multiplex biomarker platforms (Meso Scale Discovery, Luminex, Olink, AlphaLISA).

Integrate cellular, molecular, imaging, and biomarker datasets to inform project decisions and translational strategies.

Generate reproducible, high-quality data packages and communicate findings through presentations, technical reports, and cross-functional discussions.

Collaborate closely across biology, pharmacology, DMPK, and translational and clinical teams within a matrixed discovery environment.

QUALIFICATIONS:

Education:

Bachelor's (with 7+ years), Master's (with 4+ years) or Ph.D. biology, immunology, pharmacology, physiology, pulmonary biology or related discipline and relevant experience

Required Experience and Skills:

Demonstrated expertise in respiratory biology and human primary cell culture systems, including airway and/or alveolar epithelial models

Experience developing and applying disease-relevant in vitro and ex vivo systems such as ALI cultures, organoids, co-culture models, or precision-cut lung slices

Strong hands-on experience in molecular and cellular biology techniques

Experience with flow cytometry/FACS, imaging-based approaches (IHC, IF, ICC, confocal microscopy), image analysis, and multiplex biomarker platforms (Meso Scale Discovery, Luminex, Olink, AlphaLISA or equivalent)

Experience supporting translational biology, target validation, and mechanism-of-action studies

Ability to independently design, execute, troubleshoot, and interpret experimental studies

Strong scientific communication skills and ability to present findings in cross-functional settings

 

 Preferred Experience and Skills:

​Prior experience in respiratory drug discovery, fibrosis, tissue remodeling, regenerative biology, or inflammatory lung disease research

Experience with macrophage, fibroblast, epithelial, or immune-stromal co-culture systems

Experience working with patient-derived respiratory tissues and primary human lung cells

Familiarity with transcriptomic datasets including bulk RNA-seq and single-cell RNA-seq

Experience with organoid biology, human tissue-based models, or spatial biology approaches

Knowledge of translational biomarker strategies and human disease-relevant endpoints

#EligibleforERP

Required Skills:

Cell Biology, Cell Culture Techniques, Image Analysis, Immunocytochemistry (ICC), Immunohistochemistry (IHC), Luminex Assays, Meso Scale Discovery, Molecular Techniques, Pulmonary Disease Research, Target Validation

Preferred Skills:

Current Employees apply HERE

Current Contingent Workers apply HERE

US and Puerto Rico Residents Only:

Our company is committed to inclusion, ensuring that candidates can engage in a hiring process that exhibits their true capabilities. Please click here if you need an accommodation during the application or hiring process.

As an Equal Employment Opportunity Employer, we provide equal opportunities to all employees and applicants for employment and prohibit discrimination on the basis of race, color, age, religion, sex, sexual orientation, gender identity, national origin, protected veteran status, disability status, or other applicable legally protected characteristics.  As a federal contractor, we comply with all affirmative action requirements for protected veterans and individuals with disabilities.  For more information about personal rights under the U.S. Equal Opportunity Employment laws, visit:

EEOC Know Your Rights

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We are proud to be a company that embraces the value of bringing together, talented, and committed people with diverse experiences, perspectives, skills and backgrounds. The fastest way to breakthrough innovation is when people with diverse ideas, broad experiences, backgrounds, and skills come together in an inclusive environment. We encourage our colleagues to respectfully challenge one another’s thinking and approach problems collectively.

Learn more about your rights, including under California, Colorado and other US State Acts

The salary range for this role is

$131,400.00 - $206,800.00

This is the lowest to highest salary we in good faith believe we would pay for this role at the time of this posting. An employee’s position within the salary range will be based on several factors including, but not limited to relevant education, qualifications, certifications, experience, skills, geographic location, government requirements, and business or organizational needs.

The successful candidate will be eligible for annual bonus and long-term incentive, if applicable.

We offer a comprehensive package of benefits.  Available benefits include medical, dental, vision healthcare and other insurance benefits (for employee and family), retirement benefits, including 401(k), paid holidays, vacation, and compassionate and sick days. More information about benefits is available at https://jobs.merck.com/us/en/compensation-and-benefits .

You can apply for this role through https://jobs.merck.com/us/en (or via the Workday Jobs Hub if you are a current employee). The application deadline for this position is stated on this posting.

San Francisco Residents Only:  We will consider qualified applicants with arrest and conviction records for employment in compliance with the San Francisco Fair Chance Ordinance

Los Angeles Residents Only:  We will consider for employment all qualified applicants, including those with criminal histories, in a manner consistent with the requirements of applicable state and local laws, including the City of Los Angeles’ Fair Chance Initiative for Hiring Ordinance

Search Firm Representatives Please Read Carefully 

Merck & Co., Inc., Rahway, NJ, USA, also known as Merck Sharp & Dohme LLC, Rahway, NJ, USA, does not accept unsolicited assistance from search firms for employment opportunities. All CVs / resumes submitted by search firms to any employee at our company without a valid written search agreement in place for this position will be deemed the sole property of our company.  No fee will be paid in the event a candidate is hired by our company as a result of an agency referral where no pre-existing agreement is in place. Where agency agreements are in place, introductions are position specific. Please, no phone calls or emails.

Employee Status:

Regular

Relocation:

Domestic/International

VISA Sponsorship:

Yes

Travel Requirements:

10%

Flexible Work Arrangements:

Not Applicable

Shift:

1st - Day

Valid Driving License:

No

Hazardous Material(s):

N/A

Job Posting End Date:

10/14/2026 *A job posting is effective until 11:59:59PM on the day BEFORE  the listed job posting end date. Please ensure you apply to a job posting no later than the day BEFORE the job posting end date.

Requisition ID:R407396

Job details

Seniority
Senior
Function
Drug Discovery & Preclinical Research
Therapeutic area
Respiratory
Location
South San Francisco, California, United States of America
Employment type
FULL_TIME

How this role compares

Computed from every other active Drug Discovery & Preclinical Research role in our database, not just this employer's listings.

We currently track 206 comparable Senior Drug Discovery & Preclinical Research roles across 38 biopharma companies.

206Comparable roles tracked
198Currently active
38Companies hiring similar roles
12Countries represented

Salary context

84 of 206 peers report a salary range (USD, annualized)

Peers share this role's job function and a matching or adjacent seniority level -- not necessarily the same therapeutic area or country.

This roleSubject $131,400/yr – $206,800/yr
Highest disclosed · Senior Principal Scientist, Pharmacokinetics · Merck $194,100/yr – $305,600/yr
Peer group range $91,450 – $249,850 (median $184,350)

Where these roles are based

Top locations among the 206 comparable roles

United States164
India9
United Kingdom5
Belgium5
Spain4
China's Mainland4

+ 6 more countries

Seniority mix

206 of 206 peers have a known seniority level

Senior103
Principal80
Associate Director23

Therapeutic area mix

20 of 206 peers have a known therapeutic area; the rest are genuinely unlabeled, not hidden

Oncology6
Immunology4
Cardiovascular / CVRM4
Neuroscience3
Respiratory1
Gastroenterology1
Vaccines & Infectious Disease1

Similar opportunities

The closest matches from our peer group, ranked by how similar they are, not how well you'd qualify for them -- treat this as market context, not a guaranteed shortlist; a weak match is labeled as one below.

75%similar
Roche Basel, Basel-City, Switzerland Principal
Same function Same therapeutic area Adjacent seniority
60%similar
Lilly Indianapolis, Indiana, United States of America Senior
Same function Same seniority Same country
60%similar
AbbVie North Chicago, IL Senior
Same function Same seniority Same country
60%similar
AbbVie Worcester, MA Senior
Same function Same seniority Same country
60%similar
Gilead Sciences, Inc. Foster City, United States Senior
Same function Same seniority Same country
60%similar
Gilead Sciences, Inc. Foster City, United States Senior
Same function Same seniority Same country

Notify me about similar jobs

Get an email when we spot other openings like this one – same job function, comparable seniority, roles you'd actually want to see.

How we calculate "similar"

No black box, no LLM guesswork: a deterministic score built from four normalized attributes. Here's this role's own peer group at different match levels, so you can see the mechanism, not just the result.

Every comparison starts from the same 100-point budget: 25 for working in the same function, 40 for the same therapeutic area, 20 for the same or adjacent seniority, 15 for the same country. A dimension we can't confirm on both sides contributes nothing, never a guess, never a free pass.

75%
Principal Scientist, Respiratory Discovery
Roche · Basel, Basel-City, Switzerland · Principal
Function Therapeutic area Adjacent seniority Country
60%
Senior Scientist l, QTAS & ADME Sciences
AbbVie · North Chicago, IL · Senior
Function Therapeutic area Seniority Country
60%
Sr. Associate Scientist
Gilead Sciences, Inc. · Foster City, United States · Senior
Function Therapeutic area Seniority Country
60%
Sr Scientist, Inflammation Biomarkers and Translational Research
Gilead Sciences, Inc. · Foster City, United States · Senior
Function Therapeutic area Seniority Country
Unmatched or unknown dimensions score exactly the same: 0 points, never a partial guess. A role we know almost nothing about beyond its function bottoms out at 25%; it never inflates to 100% just because there's little to compare against. Seniority uses a defined ladder (Associate → Manager → Associate Director → Senior → Principal → Director → Senior Director → Executive/VP) so "Director" and "Senior Director" count as adjacent, but "Director" and "Executive/VP" do not.