Lilly Posted October 27, 2026

QC Lab Systems Analyst

Pleasant Prairie, Wisconsin, United States of America FULL_TIME
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About this opportunity

At Lilly, the work is demanding because patients are waiting. We unite caring with discovery to help make life better for people around the world, knowing that every decision, every detail, and every day matters. Headquartered in Indianapolis, Indiana, our over 50,000 employees around the globe take on complex challenges to discover and deliver life-changing medicines, strengthen how health is understood and managed, and support the communities we serve. This is hard, urgent, selfless work, but it’s work worth doing. If you’re driven by purpose and ready to bring your best to work that truly matters for patients, we invite you to join us.

Tech at Lilly QC Lab Systems Analyst  |  Lilly Kenosha

Position Summary

Lilly is entering an exciting period of growth, and we are committed to delivering innovative medicines to patients around the world. This is an exciting once-in-a-lifetime opportunity to work in a state-of-the-art manufacturing site in Pleasant Prairie, Wisconsin.

The facility will utilize the latest technology to increase the company's manufacturing capacity in parenteral (injectable) medications, device assembly and packaging operations. The Lilly Kenosha site will leverage use of high-tech equipment, advanced highly integrated and automated manufacturing systems, and have a focus on minimizing the impact to our environment.

As QC Lab Systems Analyst, your main function is to deliver, integrate, and support the computerized systems used in the Lilly Kenosha Quality Control laboratories, including the Laboratory Information Management System (LIMS), Chromatography Data System (CDS), and laboratory instrument integrations. You will partner closely with the QC laboratories, Quality Assurance, and global Tech@Lilly teams to ensure lab systems are reliable, compliant, and enable right-first-time testing and timely batch release.

At the P3 level, you will act as technical lead for QC lab systems workstreams, own solution design and integration decisions for your area, and mentor team members.

Key Responsibilities

1.  QC Lab Systems Delivery:

Design, configure, implement, enhance, and maintain QC laboratory systems, including LIMS (e.g., LabVantage), CDS (e.g., Waters Empower), and laboratory instrument data systems.

Translate QC laboratory requirements (sample management, test methods, specifications, stability, environmental monitoring, and release workflows) into system designs and master data configurations.

Lead integration of laboratory instruments and lab systems with LIMS, CDS, and enterprise systems (e.g., SAP S/4HANA, MES) using site edge connectivity and global integration patterns.

Stay up to date with emerging laboratory digital technologies (paperless lab, lab automation, data analytics) and recommend their application at the site.

2.  System Operations and Support:

As a Process Team member, own day-to-day operations of QC lab systems, ensuring availability and performance to support testing and batch release.

Lead incident, problem, and change management for lab systems, including root cause analysis for complex or recurring issues and corrective and preventive actions.

Manage system lifecycle activities, including upgrades, patching, periodic reviews, user access management, and backup, restore, and disaster recovery testing.

3.  Compliance and Data Integrity:

Ensure QC lab systems comply with 21 CFR Part 11, EU Annex 11, GMP requirements, data integrity (ALCOA+) principles, Lilly policy and procedures, and local procedures.

Own computer system validation deliverables for lab systems using a risk-based approach consistent with GAMP 5 and Lilly computer system validation standards.

Ensure audit trail review and electronic record and signature controls are designed, documented, and executed.

Serve as QC lab systems subject matter expert during internal and external inspections and ensure timely execution of findings management.

4.  Collaboration and Continuous Improvement:

Collaborate with QC Chemistry, QC Microbiology, Quality Assurance, Engineering, global Tech@Lilly lab systems teams, and vendors to drive continuous improvement in laboratory operations.

Effectively influence the business to drive value and implement the appropriate digital solutions.

5.  Technical Leadership:

Provide technical mentoring and development for lab systems team members.

Represent the site in network and global lab systems forums, benchmarking solutions internal and external to Lilly.

Basic Qualifications

Bachelor's degree in Computer Science, Engineering, Chemistry, Life Sciences, or a related field such as Chemical Engineer, Laboratory Sciences or Petroleum Engineering.

Minimum of 5 years of experience implementing or supporting QC laboratory systems (LIMS, CDS, or instrument integration) in a GMP-regulated industry.

Hands-on experience with at least one commercial LIMS or CDS (e.g., LabVantage, LabWare, Waters Empower, or Thermo Chromeleon).

In-depth understanding of 21 CFR Part 11, EU Annex 11, data integrity, and computer system validation.

Strong understanding of QC laboratory processes and workflows.

Strong analytical and problem-solving skills to identify and resolve technical issues related to lab systems, configurations, or integrations.

Preferred Qualifications

Excellent communication and interpersonal skills to build relationships with stakeholders and articulate complex technical concepts.

Adaptability and flexibility to work in a fast-paced, dynamic environment and manage multiple tasks simultaneously.

Master's degree in Computer Science, Engineering, Chemistry, Life Sciences, or a related field.

Experience configuring LabVantage (workflows, specifications, stability, environmental monitoring) or administering Waters Empower (projects, custom fields, system policies).

Experience with instrument integration and data acquisition, including scientific data management systems (SDMS), middleware, and edge connectivity platforms.

Experience integrating lab systems with ERP (e.g., SAP S/4HANA Quality Management) and MES.

Experience with IT service management (ITSM) frameworks such as ITIL, and tools such as ServiceNow.

Understanding of cybersecurity concepts and best practices for laboratory systems and networked instruments.

Experience with Agile or LEAN methodologies.

Experience deploying lab systems at a new or expanding manufacturing site.

Exposure to international operations, diverse teams, global IT projects, or working in a global organization.

Proficiency with SQL and scripting languages (e.g., Python, JavaScript).

Other Information

Role is Monday through Friday and based on-site. Must be flexible in providing support to accommodate other inputs (laboratory testing schedules, production schedules, shutdowns, etc.). Occasional extended-hour and/or off-hour work may be required.

Position will be based in the Pleasant Prairie, Wisconsin area with the ability to travel to other U.S. Lilly sites and other global Lilly sites as required.

Lilly is dedicated to helping individuals with disabilities to actively engage in the workforce, ensuring equal opportunities when vying for positions. If you require accommodation to submit a resume for a position at Lilly, please complete the accommodation request form ( https://careers.lilly.com/us/en/workplace-accommodation ) for further assistance. Please note this is for individuals to request an accommodation as part of the application process and any other correspondence will not receive a response.

Lilly is proud to be an EEO Employer and does not discriminate on the basis of age, race, color, religion, gender identity, sex, gender expression, sexual orientation, genetic information, ancestry, national origin, protected veteran status, disability, or any other legally protected status.

Our employee resource groups (ERGs) offer strong support networks for their members and are open to all employees. Our current groups include: Africa, Middle East, Central Asia (AMECA), Black Employees at Lilly (BE@Lilly), Chinese Culture Network (CCN), EnAble, Evolve, Lilly Indian Network (LIN), Organization of Latinx at Lilly (OLA), Pride (LGBTQ+ Allies), Veterans Leadership Network (VLN) and Women’s Initiative for Leading at Lilly (WILL).

Actual compensation will depend on a candidate’s education, experience, skills, and geographic location.  The anticipated wage for this position is

$66,000 - $96,800

Full-time equivalent employees also will be eligible for a company bonus (depending, in part, on company and individual performance). In addition, Lilly offers a comprehensive benefit program to eligible employees, including eligibility to participate in a company-sponsored 401(k); pension; vacation benefits; eligibility for medical, dental, vision and prescription drug benefits; flexible benefits (e.g., healthcare and/or dependent day care flexible spending accounts); life insurance and death benefits; certain time off and leave of absence benefits; and well-being benefits (e.g., employee assistance program, fitness benefits, and employee clubs and activities).Lilly reserves the right to amend, modify, or terminate its compensation and benefit programs in its sole discretion and Lilly’s compensation practices and guidelines will apply regarding the details of any promotion or transfer of Lilly employees.

#WeAreLilly

Job details

Seniority
Not listed
Function
Quality
Therapeutic area
Not listed
Location
Pleasant Prairie, Wisconsin, United States of America
Employment type
FULL_TIME

How this role compares

Computed from every other active Quality role in our database, not just this employer's listings.

We currently track 1502 comparable Quality roles across 147 biopharma companies.

1502Comparable roles tracked
1357Currently active
147Companies hiring similar roles
54Countries represented

Salary context

260 of 1502 peers report a salary range (USD, annualized)

Peers share this role's job function. This posting doesn't list a seniority level, so peers aren't narrowed by seniority either -- the range below may span more levels than usual.

This roleSubject $66,000/yr – $96,800/yr
Lowest disclosed · QC Lab Technician (Lilly Contractor - Fixed Term) · Lilly $13/hr – $29/hr (≈ $26,998–$60,507/yr)
Highest disclosed · VP, Quality Assurance · City Therapeutics $340,000/yr – $360,000/yr
Peer group range $43,753 – $350,000 (median $123,250)

Where these roles are based

Top locations among the 1502 comparable roles

United States588
Ireland88
Germany72
China72
France67
India57

+ 48 more countries

Seniority mix

731 of 1502 peers have a known seniority level

Manager223
Senior189
Intern/Fellow/Postdoc98
Associate65
Director46
Associate Director45
Principal33
Senior Director25
Executive/VP7

Therapeutic area mix

3 of 1502 peers have a known therapeutic area; the rest are genuinely unlabeled, not hidden

Vaccines & Infectious Disease2
Respiratory1

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The closest matches from our peer group, ranked by how similar they are, not how well you'd qualify for them -- treat this as market context, not a guaranteed shortlist; a weak match is labeled as one below.

40%similar
Lilly Lebanon, Indiana, United States of America Principal
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40%similar
AbbVie North Chicago, IL Manager
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Gilead Sciences, Inc. La Verne, United States
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40%similar
Gilead Sciences, Inc. La Verne, United States Senior
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40%similar
Regeneron Pharmaceuticals, Inc (USA) Renss, United States Manager
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Notify me about similar jobs

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How we calculate "similar"

No black box, no LLM guesswork: a deterministic score built from four normalized attributes. Here's this role's own peer group at different match levels, so you can see the mechanism, not just the result.

Every comparison starts from the same 100-point budget: 25 for working in the same function, 40 for the same therapeutic area, 20 for the same or adjacent seniority, 15 for the same country. A dimension we can't confirm on both sides contributes nothing, never a guess, never a free pass.

40%
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Function Therapeutic area Seniority Country
Unmatched or unknown dimensions score exactly the same: 0 points, never a partial guess. A role we know almost nothing about beyond its function bottoms out at 25%; it never inflates to 100% just because there's little to compare against. Seniority uses a defined ladder (Associate → Manager → Associate Director → Senior → Principal → Director → Senior Director → Executive/VP) so "Director" and "Senior Director" count as adjacent, but "Director" and "Executive/VP" do not.