Lilly Posted July 29, 2026

Sr. Principal Engineer, Automation Engineering, Controls System Hardware - Lilly Medicine Foundry

Lebanon, Indiana, United States of America FULL_TIME
Manufacturing & CMC Principal

Lilly is the source of truth for this posting and owns the application process. We surface normalized context and market comparison you won't find on the original listing.

About this opportunity

At Lilly, the work is demanding because patients are waiting. We unite caring with discovery to help make life better for people around the world, knowing that every decision, every detail, and every day matters. Headquartered in Indianapolis, Indiana, our over 50,000 employees around the globe take on complex challenges to discover and deliver life-changing medicines, strengthen how health is understood and managed, and support the communities we serve. This is hard, urgent, selfless work, but it’s work worth doing. If you’re driven by purpose and ready to bring your best to work that truly matters for patients, we invite you to join us.

The Senior Principal Engineer - Automation Engineering will work as a member of the Automation Engineering Department at Eli Lilly, Foundry. The principal engineer will provide automation support for one or more operating areas across site and/or for capital projects, with primary focus on Instrumentation and Control Hardware. Process Automation is core to delivering the right first-time facility start up and continued support of ongoing manufacturing operations into the future.

The Principal Engineer is also responsible for the productivity and mentorship of the other Engineers in the team with the purpose of ensuring that reliable and compliant control applications and systems are used in the manufacturing at Foundry.  Additionally, the Principal Engineer, as a key technical expert will collaborate with partners within the process control organization and across functional disciplines to support the process control technical agenda, business plan priorities, and compliance objectives.

In the project delivery phase and startup phase of the project (startup expected 2026 to 2028), automation engineering roles will be fluid and dynamic as we endeavor to support the project delivery, build a new organization, develop and implement the necessary systems and business processes required to support GMP operations, and build the site culture. This will require significant collaboration, creativity and resilience as the site grows to a full scale GMP manufacturing through start up.

Key Objectives/Deliverables:

Lead site operation support, capital project execution and commissioning & qualification.

Demonstrated ability in translating technical concepts for executive audience and/or non-technical stakeholders.

Deep Expertise working with DeltaV Distributed Control System, Batch Process Automation.

Deep Expertise working with Rockwell Allen Bradley PLC’s, FactoryTalk View.

Expertise working with DeltaV control panels, DeltaV Remote I/O panels and Rockwell I/O’s.

Expertise in performing automation engineering activities including design, Development and Commissioning Process Automation projects using DeltaV DCS, tuning and troubleshooting of control loops.

Thorough understanding of various process control communication protocols.

Develop and implement the Automation Engineering Project Plan.

Define strategies for periodic and corrective maintenance of Instruments and Control hardware.

Operational Excellence

System level thinking and expertise working with multi-disciplinary teams.

Technical Leadership in leading projects from concept through Commissioning and Qualification.

Demonstrated ability in resolving complex technical challenges with instrument and control system hardware.

Technically lead and oversee the work of Site Area leads and System Integrators.

Develop and Review Functional Requirements, Design Specifications and Test Specifications.

Thorough understanding of 21CFR Part 11, GMP processes.

Demonstrated experience with developing and utilizing Master maintenance plans.

Lead/Participate in design reviews and Site system hardware reviews, attend equipment and FATs.

Provide periodic status updates to Leadership and Project Management.

Implement and support electronic systems (such as plant historians) used to capture process automation related production data.

Maintain the validated state of the site control system hardware in line with Lilly quality standards including the development and execution of validation strategies and associated documentation.

Promote the use of automation to improve productivity, operational efficiency and compliance.

Develop a ‘network’ of corporate contacts and leverage corporate expertise when needed.

Experience in clinical-stage manufacturing with flexible, multi-product capabilities is preferred.

Organizational Capability

In coordination with automation and compliance consultants, set and reinforce standards for appropriate rigor in automation work products.

Mentor process control team to strengthen technical capabilities and adopt best practices to enhance system reliability and business continuity.

Be a fully active member of the flow leadership in running the plant, including participation on technical sub-teams.

Basic Requirements:

Minimum B.S. in Engineering or related field and experience in Automation Engineering

8+ years working experience in Pharmaceutical or highly regulated environment

Experience working in highly automated facility, using DeltaV DCS, Rockwell Allen Bradley PLC, Veeva, PI, and/or BMS Warehouse Monitoring from design through Startup.

Knowledge of GMP, regulatory requirements, computer system validation

Available to participate in a rotational on-call schedule

Qualified applicants must be authorized to work in the United States on a full-time basis. Lilly will not provide support for or sponsor work authorization or visas for this role, including but not limited to F-1 CPT, F-1 OPT, F-1 STEM OPT, J-1, H-1B, TN, O-1, E-3, H-1B1, or L-1.

Preferred Requirements:

Demonstrated initiative, good planning and organizational skills, ability to prioritize tasks, commitment to task completion and timelines.

Hands-on experience working directly with automation control panel hardware and wiring.

Possess a keen technical curiosity and has demonstrated strong problem-solving skills and a desire for continuous improvement

Demonstrated ability to influence peers and business partners, influence without authority.

Good written and verbal communication skills for both technical and non-technical audiences

Lilly is dedicated to helping individuals with disabilities to actively engage in the workforce, ensuring equal opportunities when vying for positions. If you require accommodation to submit a resume for a position at Lilly, please complete the accommodation request form ( https://careers.lilly.com/us/en/workplace-accommodation ) for further assistance. Please note this is for individuals to request an accommodation as part of the application process and any other correspondence will not receive a response.

Lilly is proud to be an EEO Employer and does not discriminate on the basis of age, race, color, religion, gender identity, sex, gender expression, sexual orientation, genetic information, ancestry, national origin, protected veteran status, disability, or any other legally protected status.

Our employee resource groups (ERGs) offer strong support networks for their members and are open to all employees. Our current groups include: Africa, Middle East, Central Asia (AMECA), Black Employees at Lilly (BE@Lilly), Chinese Culture Network (CCN), EnAble, Evolve, Lilly Indian Network (LIN), Organization of Latinx at Lilly (OLA), Pride (LGBTQ+ Allies), Veterans Leadership Network (VLN) and Women’s Initiative for Leading at Lilly (WILL).

Actual compensation will depend on a candidate’s education, experience, skills, and geographic location.  The anticipated wage for this position is

$66,000 - $171,600

Full-time equivalent employees also will be eligible for a company bonus (depending, in part, on company and individual performance). In addition, Lilly offers a comprehensive benefit program to eligible employees, including eligibility to participate in a company-sponsored 401(k); pension; vacation benefits; eligibility for medical, dental, vision and prescription drug benefits; flexible benefits (e.g., healthcare and/or dependent day care flexible spending accounts); life insurance and death benefits; certain time off and leave of absence benefits; and well-being benefits (e.g., employee assistance program, fitness benefits, and employee clubs and activities).Lilly reserves the right to amend, modify, or terminate its compensation and benefit programs in its sole discretion and Lilly’s compensation practices and guidelines will apply regarding the details of any promotion or transfer of Lilly employees.

#WeAreLilly

Job details

Seniority
Principal
Function
Manufacturing & CMC
Therapeutic area
Not listed
Location
Lebanon, Indiana, United States of America
Employment type
FULL_TIME

How this role compares

Computed from every other active Manufacturing & CMC role in our database, not just this employer's listings.

We currently track 393 comparable Principal Manufacturing & CMC roles across 56 biopharma companies.

393Comparable roles tracked
368Currently active
56Companies hiring similar roles
19Countries represented

Salary context

188 of 393 peers report a salary range (USD, annualized)

Peers share this role's job function and a matching or adjacent seniority level -- not necessarily the same therapeutic area or country.

This roleSubject $66,000/yr – $171,600/yr
Lowest disclosed · Senior Scientist II – CMC Developmental Sciences · AbbVie $0/hr – $0/hr (≈ $0–$0/yr)
Highest disclosed · Director, Global Automation Engineering · AbbVie $182,000/yr – $346,000/yr
Peer group range $0 – $264,000 (median $150,600)

Where these roles are based

Top locations among the 393 comparable roles

United States282
India42
Singapore10
Ireland9
Netherlands7
Switzerland6

+ 13 more countries

Seniority mix

393 of 393 peers have a known seniority level

Senior251
Principal78
Director64

Therapeutic area mix

2 of 393 peers have a known therapeutic area; the rest are genuinely unlabeled, not hidden

Oncology1
Vaccines & Infectious Disease1

Similar opportunities

The closest matches from our peer group, ranked by how similar they are, not how well you'd qualify for them -- treat this as market context, not a guaranteed shortlist; a weak match is labeled as one below.

60%similar
Lilly Indianapolis, Indiana, United States of America Principal
Same function Same seniority Same country
60%similar
Lilly Louisville, Colorado, United States of America Principal
Same function Same seniority Same country
60%similar
Lilly Indianapolis, Indiana, United States of America Principal
Same function Same seniority Same country
60%similar
Lilly Watertown, Massachusetts, United States of America Principal
Same function Same seniority Same country
60%similar
Lilly Indianapolis, Indiana, United States of America Principal
Same function Same seniority Same country
60%similar
Lilly Indianapolis, Indiana, United States of America Principal
Same function Same seniority Same country

How we calculate "similar"

No black box, no LLM guesswork: a deterministic score built from four normalized attributes. Here's this role's own peer group at different match levels, so you can see the mechanism, not just the result.

Every comparison starts from the same 100-point budget: 25 for working in the same function, 40 for the same therapeutic area, 20 for the same or adjacent seniority, 15 for the same country. A dimension we can't confirm on both sides contributes nothing, never a guess, never a free pass.

60%
Senior/Principal Scientist, Bioprocess Purification Development
Lilly · Indianapolis, Indiana, United States of America · Principal
Function Therapeutic area Seniority Country
60%
Senior Principal Scientist, Analytical Sciences
Lilly · Watertown, Massachusetts, United States of America · Principal
Function Therapeutic area Seniority Country
60%
Sr. Principal or Engineering Advisor - Agentic Lab Automation Integration
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Function Therapeutic area Seniority Country
60%
Principal Scientist, Downstream Process Development
Merck · Rahway, New Jersey, United States of America · Principal
Function Therapeutic area Seniority Country
Unmatched or unknown dimensions score exactly the same: 0 points, never a partial guess. A role we know almost nothing about beyond its function bottoms out at 25%; it never inflates to 100% just because there's little to compare against. Seniority uses a defined ladder (Associate → Manager → Associate Director → Senior → Principal → Director → Senior Director → Executive/VP) so "Director" and "Senior Director" count as adjacent, but "Director" and "Executive/VP" do not.