Lilly Posted July 17, 2026

Associate Director – Biologics Process Engineering, Lilly Medicine Foundry

Lebanon, Indiana, United States of America FULL_TIME
Manufacturing & CMC Associate Director

Lilly is the source of truth for this posting and owns the application process. We surface normalized context and market comparison you won't find on the original listing.

About this opportunity

At Lilly, we unite caring with discovery to make life better for people around the world. We are a global healthcare leader headquartered in Indianapolis, Indiana. Our employees around the world work to discover and bring life-changing medicines to those who need them, improve the understanding and management of disease, and give back to our communities through philanthropy and volunteerism. We give our best effort to our work, and we put people first. We’re looking for people who are determined to make life better for people around the world.

Lilly recently announced a   $4.5 billion   investment to create the Lilly Medicine Foundry, a new center for advanced manufacturing and drug development. The first-ever facility of its kind, combining research and manufacturing in   a single location , the Medicine Foundry will allow Lilly to further develop innovative solutions to   optimize   manufacturing processes and increase capacity for clinical trial medicines, while also reducing costs and environmental impact.

The Associate Director, Biologics Process Engineering provides leadership and direction to the process engineering team to ensure that engineering deliverables are sufficiently resourced and qualified to support biologics drug substance manufacturing and the broader business agenda. This role   is responsible for   the productivity and development of process engineers with the purpose of ensuring that reliable and compliant equipment and systems are used in the manufacture of biologic products, including monoclonal antibodies, bioconjugates, and other large molecule modalities.

The Biologics Process Engineering Team Leader leads the process engineering organization and influences across functional teams to support the process engineering agenda, business plan priorities, and compliance plan   objectives .

In the project delivery and startup phase of the Lilly Medicine Foundry (startup expected 2025 to 2027), leadership roles will be fluid and dynamic as we endeavor to support project delivery, build a new organization, develop and implement the necessary systems and business processes required to support GMP operations, and build the site culture. This will require significant collaboration, creativity, and resilience as the site evolves from a design concept to a GMP clinical trial site.

Key Responsibilities

Responsible for   establishing   a technically advanced   biologics   process engineering group. This is achieved through recruitment, supervision, coaching, succession planning, and   establishing   actionable development plans, inclusive of completing performance reviews and development planning.

Provide process engineering work coordination and guidance to key functional groups and partners supporting biologics manufacturing operations, including upstream (cell culture/fermentation) and downstream (purification, filtration, formulation) unit operations.

In coordination with the engineering function, set and reinforce standards for engineering work product and   utilization   of first principles. Partner within Engineering and across functional teams to influence and implement the technical agenda, site business plan   objectives , and GMP Quality Plan   objectives .

Ensure   appropriate process   engineering support for   biologics   operations including facility fit assessments, process troubleshooting, scale-up/scale-down support, and continuous process improvements for biologic drug substance manufacturing.

Oversee engineering-related technical issues, improvement initiatives, and technology upgrades specific to biologics unit operations (e.g., bioreactors, chromatography systems, TFF/UF-DF, sterile filtration, single-use systems). Review and approve engineering-related deviations and change controls.

Ensure GMP compliance of facilities, processes, and documentation,   maintaining   the organization in a state of   inspection   readiness. Ensure all process engineering activities and documentation are performed in alignment with current data integrity requirements.

Ensure technical review and approval for documents as   appropriate , including investigations, change controls, regulatory submissions, expert opinions, validations, annual product reviews, manufacturing records, procedures, process flow documents, personnel qualification strategies, control strategies, technical studies, and biologics-specific documents such as process characterization reports and comparability assessments.

Identify , track, and report key indicators of functional performance.

Partner appropriately in site planning processes (capital and resource),   representing   the interests of the team with a view to the overall site picture and future biologics portfolio.

Serves as System Owner for designated computer, automation, and bioprocess control systems (e.g., bioreactor SCADA, process chromatography systems).

Interact with regulators, customers, or other outside stakeholders on business issues or in support of internal and external agency audits, including BLA/IND-relevant inspections.

Network globally to share best practices, control strategies, and process rationale to ensure harmonization and alignment between Lilly biologics manufacturing sites.

Startup Phase Responsibilities (2025–2027)

During the startup phase of the Lilly Medicine Foundry, leadership will be expected to be collaborative, inclusive, and support the broader team to:

Build the biologics process engineering organization with the necessary capability, capacity, and culture to   operate   this facility to the highest standards of operational excellence.

Develop and implement the systems and processes needed to run the site,   leveraging   existing Lilly biologics knowledge and practices where applicable, while also incorporating external experiences and learnings from the broader biopharmaceutical industry.

Ensure regulatory compliance and operational excellence by supporting lean principles in their respective   area .

Support the project team as they deliver the facility to the site team by providing feedback and input on biologics-specific design requirements.

Basic Requirements

Bachelor's degree in Engineering , Biochemical Engineering, Chemical Engineering, or   a related   science field.

5+ years of experience in a process engineering role supporting   biologics   drug substance manufacturing or development activities, preferably in a GMP manufacturing environment.

Demonstrated experience with upstream and/or downstream biologics unit operations (bioreactors, chromatography, filtration, formulation).

Additional Preferences

Experience leading a team of process engineers highly preferred

Thorough understanding of bioprocess development and operations, regulatory requirements (FDA, ICH), cGMP, HSE regulations, and data integrity requirements as they apply to   biologics   manufacturing.

Experience with single-use technology systems and associated engineering considerations.

Familiarity with   biologics   regulatory submissions (IND, BLA, CTD modules) and process characterization/validation requirements.

Capable of collaborating effectively within a team, making autonomous decisions, and influencing a diverse range of groups.

Skilled at fostering teamwork within the department and   showcasing   essential interpersonal skills.

Proficient in devising creative solutions to plant, divisional, and corporate issues, while   leveraging   insights from various functional areas.

Experience with cell culture media/feed strategies, viral clearance requirements, and   biologics -specific contamination control strategies is a plus.

Other Information

Initial location at   Parkwood West , Indianapolis.

Permanent location at the new Lilly Medicine Foundry in Lebanon, Indiana.

Position is standard business hours with flexibility to support activities during   startup , shutdowns, and weekends as   required .

Travel is possible but expected to be minimal.

Lilly is an EEO/Affirmative Action Employer and does not discriminate on the basis of age, race, color, religion, gender, sexual orientation, gender identity, gender expression, national origin, protected veteran status, disability or any other legally protected status. #WeAreLilly

Lilly is dedicated to helping individuals with disabilities to actively engage in the workforce, ensuring equal opportunities when vying for positions. If you require accommodation to submit a resume for a position at Lilly, please complete the accommodation request form ( https://careers.lilly.com/us/en/workplace-accommodation ) for further assistance. Please note this is for individuals to request an accommodation as part of the application process and any other correspondence will not receive a response.

Lilly is proud to be an EEO Employer and does not discriminate on the basis of age, race, color, religion, gender identity, sex, gender expression, sexual orientation, genetic information, ancestry, national origin, protected veteran status, disability, or any other legally protected status.

Our employee resource groups (ERGs) offer strong support networks for their members and are open to all employees. Our current groups include: Africa, Middle East, Central Asia Network, Black Employees at Lilly, Chinese Culture Network, Japanese International Leadership Network (JILN), Lilly India Network, Organization of Latinx at Lilly (OLA), PRIDE (LGBTQ+ Allies), Veterans Leadership Network (VLN), Women’s Initiative for Leading at Lilly (WILL), enAble (for people with disabilities). Learn more about all of our groups.

Actual compensation will depend on a candidate’s education, experience, skills, and geographic location.  The anticipated wage for this position is

$123,000 - $180,400

Full-time equivalent employees also will be eligible for a company bonus (depending, in part, on company and individual performance). In addition, Lilly offers a comprehensive benefit program to eligible employees, including eligibility to participate in a company-sponsored 401(k); pension; vacation benefits; eligibility for medical, dental, vision and prescription drug benefits; flexible benefits (e.g., healthcare and/or dependent day care flexible spending accounts); life insurance and death benefits; certain time off and leave of absence benefits; and well-being benefits (e.g., employee assistance program, fitness benefits, and employee clubs and activities).Lilly reserves the right to amend, modify, or terminate its compensation and benefit programs in its sole discretion and Lilly’s compensation practices and guidelines will apply regarding the details of any promotion or transfer of Lilly employees.

#WeAreLilly

Job details

Seniority
Associate Director
Function
Manufacturing & CMC
Therapeutic area
Not listed
Location
Lebanon, Indiana, United States of America
Employment type
FULL_TIME

How this role compares

Computed from every other active Manufacturing & CMC role in our database, not just this employer's listings.

We currently track 459 comparable Associate Director Manufacturing & CMC roles across 66 biopharma companies.

459Comparable roles tracked
426Currently active
66Companies hiring similar roles
27Countries represented

Salary context

150 of 459 peers report a salary range (USD, annualized)

Peers share this role's job function and a matching or adjacent seniority level -- not necessarily the same therapeutic area or country.

This roleSubject $123,000/yr – $180,400/yr
Lowest disclosed · Senior Scientist II – CMC Developmental Sciences · AbbVie $0/hr – $0/hr (≈ $0–$0/yr)
Highest disclosed · Associate Director Packaging Development · Gilead Sciences, Inc. $182,070/yr – $235,620/yr
Peer group range $0 – $208,845 (median $150,600)

Where these roles are based

Top locations among the 459 comparable roles

United States275
India67
Ireland18
Singapore14
China's Mainland11
Switzerland10

+ 21 more countries

Seniority mix

459 of 459 peers have a known seniority level

Senior251
Manager165
Associate Director43

Therapeutic area mix

0 of 459 peers have a known therapeutic area; the rest are genuinely unlabeled, not hidden

No peers with a known therapeutic area yet.

Similar opportunities

The closest matches from our peer group, ranked by how similar they are, not how well you'd qualify for them -- treat this as market context, not a guaranteed shortlist; a weak match is labeled as one below.

60%similar
Lilly Indianapolis, Indiana, United States of America Associate Director
Same function Same seniority Same country
60%similar
Merck Rahway, New Jersey, United States of America Associate Director
Same function Same seniority Same country
60%similar
AbbVie North Chicago, IL Associate Director
Same function Same seniority Same country
60%similar
AbbVie North Chicago, IL Associate Director
Same function Same seniority Same country
60%similar
AbbVie North Chicago, IL Associate Director
Same function Same seniority Same country
60%similar
Novartis Watertown (Massachusetts), United States Associate Director
Same function Same seniority Same country

How we calculate "similar"

No black box, no LLM guesswork: a deterministic score built from four normalized attributes. Here's this role's own peer group at different match levels, so you can see the mechanism, not just the result.

Every comparison starts from the same 100-point budget: 25 for working in the same function, 40 for the same therapeutic area, 20 for the same or adjacent seniority, 15 for the same country. A dimension we can't confirm on both sides contributes nothing, never a guess, never a free pass.

60%
Associate Director, CMC Project Management
Lilly · Indianapolis, Indiana, United States of America · Associate Director
Function Therapeutic area Seniority Country
60%
Associate Director, CMC Portfolio Management
AbbVie · North Chicago, IL · Associate Director
Function Therapeutic area Seniority Country
60%
Assoc Director, Outsourced Manufacturing
Gilead Sciences, Inc. · Foster City, United States · Associate Director
Function Therapeutic area Seniority Country
60%
Associate Director, Master Production Planner
Gilead Sciences, Inc. · Foster City, United States · Associate Director
Function Therapeutic area Seniority Country
Unmatched or unknown dimensions score exactly the same: 0 points, never a partial guess. A role we know almost nothing about beyond its function bottoms out at 25%; it never inflates to 100% just because there's little to compare against. Seniority uses a defined ladder (Associate → Manager → Associate Director → Senior → Principal → Director → Senior Director → Executive/VP) so "Director" and "Senior Director" count as adjacent, but "Director" and "Executive/VP" do not.